Publications des agents du Cirad

Cirad

Tryptophanins: isolation and molecular characterization of oat cDNA clones encoding proteins structurally related to puroindoline and wheat grain softness proteins

Tanchak M.A., Schernthaner J.P., Giband M., Altosaar I.. 1998. Plant Science, 137 : p. 173-184.

DOI: 10.1016/S0168-9452(98)00105-8

The sequences of four oat cDNA clones, 3B3-5, 3B3 -7, 3B3T-3 and 3B3T-5, isolated from developing seeds, are all found to possess sequences encoding a characteristic tryptophan-rich domain and, for this reason, have been named tryptophanins. 3B3-3 and 3B3-7 are predicted to encode two similar proteins, each consisting of 147 amino acids. 3B3T-3 and 3B3T-5 are predicted to encode identical proteins, 142 amino acids in length. The oat tryptophanins share sequence identity with two wheat seed proteins, puroindoline and wheat grain softness protein. The tryptophan-rich domains show similarity with the antimicrobial peptide, bovine indolicidin. Copy number reconstruction experiments indicate that the oat tryptophanins are encoded by a multi-gene family. RNA slot blot experiments verify the seed-specific expression of oat tryptophanins while northern blot experiments indicate that cross-hybridizing RNAs are also present in developing wheat, barley, and rye seeds but not in developing rice seeds.

Mots-clés : avena; clone; adn; séquence nucléotidique; tryptophane; triticum; albumine; endosperme; protéine de réserve

Documents associés

Article (a-revue à facteur d'impact)

Agents Cirad, auteurs de cette publication :