An automated image-processing pipeline for high-throughput analysis of root architecture in OpenAlea
Diener J., Nacry P., Perin C., Diévart A., Draye X., Boudon F., Gaujon A., Godin C.. 2013. In : Eds. Risto Sievänen, Eero Nikinmaa, Christophe Godin, Anna Lintunen, Pekka Nygren. Proceedings of the 7th International Conference on Functional-Structural Plant Models (FSPM2013), Saariselkä, Finland, 9-14 June 2013. Vantaa : Finnish Society of Forest Science, p. 85-87. International Conference on Functional-Structural Plant Models. 7, 2013-06-09/2013-06-14, Saariselkä (Finlande).
FSPM analysis of root systems requires structural data obtained on large data set. This paper describes a processing pipeline developed to extract automatically the architecture of root system from images databases.
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Agents Cirad, auteurs de cette publication :
- Boudon Frédéric — Bios / UMR AGAP
- Dievart-Gilbert Anne — Dgdrs / Dgdrs - disco
- Perin Christophe — Bios / UMR AGAP