African animal trypanosomoses are the main parasitological constraints to livestock production in many sub-Saharan African countries infested with tsetse flies. A prospective survey was implemented in Dafinso (Burkina Faso) to assess the effect of deltamethrin 0.005% (VectocidND, CEVA Sante´ Animale) impregnation of cattle on trypanosomes transmission in cattle. Two herds were involved in the survey. They were watered at two different waterpoints located on the same river harboring a Guinean riparian forest infested with two different species of tsetse flies (Diptera: Glossinidae), Glossina palpalis gambiensis Vanderplank and G. tachinoides Westwood. Animals belonging to one of the herds were impregnated with deltamethrin applied with a footbath whereas the other herd was used as control. The overall incidence of cattle trypanosomoses was reduced (p = 0.01) from 0.76 (control group) to 0.11 (footbath-treated group). A positive effect of the footbath treatment on packed-cell volume was observed (p < 0.001). The conditions requested to use a footbath to prevent cattle trypanosomoses are discussed.