Rice mutant resources to unravel adaptive processes in cereals
Dievart A., Perin C., Brasileiro A.C.M., Gantet P., Breitler J.C., Larmande P., Lorieux M., Droc G., Pereira A., Guiderdoni E.. 2007. In : Frontier Research in Model Plants, Taipei, Taiwan, October 11-12, 2007. s.l. : s.n., p. 4-5. Frontier Research in Model Plants, 2007-10-11/2007-10-12, Taipei (Taïwan).
To contribute to the international effort of production of sequence-indexed insertion libraries in rice, we have generated a collection of 30,000 Nipponbare lines which are characterized by 25,000 and 15,000 flanking sequence tags of T-DNA and Tos17 inserts respectively. These lines are being field evaluated and seed increased in CIAT, Colombia and the phenotypes documented in the Oryza. Tag Line database at http://urgi.versailles.inra.fr/OryzaTagLine/. This work was conducted in the frame of the national genomics initiative Génoplante (http://genoplante.com) and also supported by the National Sequencing Centre, Génoscope. In France, several research groups are now using these resources to decipher the molecular control of grain filling processes, response to biotic and abiotic stresses and of plant architecture determinants. Our group has focused its research on root development and plasticity in response to osmotic stress. Aside forward genetic screens which have yielded tagged mutants currently under analysis, a medium scale reverse genetics screen was rondncted in the frame of projects supported by the Generation Challenge Program and the European Union. This screen included genes identified through expression profiling in osmotic- and salt stressed tissues (SSH microarrays) or orthologs of Arabidopsis developmental and stress-related genes, and also a long term, overall investigation of the role of the rice Leucine-rich repeat receptor like kinase (LRR-RLK) (320 genes), CLV3 like (30 genes) and WOX (15 genes) genes in development and biotic/abiotic stress response. Due to the recent establishment and characterization of large libraries of insertion lines in rice, 961 insertions (i.e. 3.8 per gene) have been identified for 255 (70%) of the LRR-RLK genes in the FST databases (http://OryGenesDB.cirad.fr). 102 lines from international collections have been tested by Southern using a gene specific probe and a rearranged fragment was observed in 81 lines. Once homozy
Mots-clés : plante céréalière; oryza; colombie
Communication de congrès
Agents Cirad, auteurs de cette publication :
- Breitler Jean-Christophe — Bios / UMR DIADE
- Dievart-Gilbert Anne — Dgdrs / Dgdrs - disco
- Droc Gaëtan — Bios / UMR AGAP
- Guiderdoni Emmanuel — Bios / UMR AGAP
- Perin Christophe — Bios / UMR AGAP