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Fernandez Emmanuel

Unité d'affectation : UMR PHIM (Bios)

Année de publication :

Type de document :

114 publications

Virome release of an invasive exotic plant species in southern France

Moubset O., Filloux D., Fontes H., Julian C., Fernandez E., Galzi S., Blondin L., Ben Chehida S., Lett J.M., Mesleard F., Kraberger S., Custer J.M., Salywon A.M., Makings E., Marais A., Chiroleu F., Lefeuvre P., Martin D.P., Candresse T., Varsani A., Ravigné V., Roumagnac P.. 2024. Virus Evolution, 10 (1) : 16 p..

DOI: 10.5281/zenodo.10159099

DOI: 10.1093/ve/veae025

Article (a-revue à facteur d'impact)

Genetic diversity, evolution, and diagnosis of sugarcane yellow leaf virus from 19 sugarcane-producing locations worldwide

Rott P., Grinstead S., Dallot S., Foster Z.S.L., Daugrois J.H., Fernandez E., Kaye C., Hendrickson L., Hu X., Adhikari B., Malapi M., Grunwald N.J., Roumagnac P., Mollov D.S.. 2023. Plant Disease, 10711 : p. 3437-3447.

DOI: 10.1094/PDIS-10-22-2405-RE

Article (a-revue à facteur d'impact)

Immunological, molecular, and pathogenic characterization of sugarcane streak mosaic virus isolates from six asian countries

Rott P., Chatenet M., Mazarin C., Fernandez E., Gargani D., Royer M., Rao G.P., Lockhart B.E.L., Girard J.C.. 2023. Sugar Tech, 25 : p. 1134-1143.

DOI: 10.1007/s12355-023-01269-w

Article (a-revue à facteur d'impact)

Sugarcane mild mosaic virus: The rediscovery of an identified but unrecognized virus

Mollov D.S., Filloux D., Grinstead S., Bolus S., Claude L., Fernandez E., Julian C., Candresse T., Lockhart B.E.L., Roumagnac P., Rott P., Daugrois J.H.. 2023. Plant Pathology, 72 (2) : p. 312-321.

DOI: 10.1111/ppa.13654

Article (a-revue à facteur d'impact)

The genome of a bunyavirus cannot be defined at the level of the viral particle but only at the scale of the viral population

Yvon M., German T.L., Ullman D.E., Dasgupta R., Parker M.H., Ben-Mahmoud S., Verdin E., Gognalons P., Ancelin A., Laï Kee Him J., Girard J., Vernerey M.S., Fernandez E., Filloux D., Roumagnac P., Bron P., Michalakis Y., Blanc S.. 2023. Proceedings of the National Academy of Sciences of the United States of America, 120 (48) : 10 p..

DOI: 10.1073/pnas.2309412120

Article (a-revue à facteur d'impact)

African army ants at the forefront of virome surveillance in a remote tropical forest

Fritz M., Reggiardo B., Filloux D., Claude L., Fernandez E., Mahe F., Kraberger S., Custer J.M., Becquart P., Mebaley T.N., Kombila L.B., Lenguiya L.H., Boundenga L., Mombo I.M., Maganga G.D., Niama F.R., Koumba J.S., Ogliastro M., Yvon M., Martin D.P., Blanc S., Varsani A., Leroy E.M., Roumagnac P.. 2023. Peer Community Journal, 3 : 21 p..

DOI: 10.5281/zenodo.7708934

DOI: 10.24072/pcjournal.249

Article (b-revue à comité de lecture)

Impact of genetic diversity on diagnosis of sugarcane yellow leaf virus

Rott P., Grinstead S., Dallot S., Foster Z.S.L., Daugrois J.H., Fernandez E., Kaye C., Hendrickson L., Hu X., Adhikari B., Malapi M., Grunwald N.J., Roumagnac P., Mollov D.S.. 2023. In : 19e Rencontres de virologie végétale (RVV2023). Résumés. Aussois : SFV, p. 121. Rencontres de Virologie Végétale (RVV2023). 19, 2023-01-15/2023-01-19, Aussois (France).

Communication de congrès

Once upon a time, the VANA story based on the review "virion-associated nucleic acid-based metagenomics : a decade of advances in molecular characterization of plant viruses"

Moubset O., François S., Maclot F., Palanga E., Julian C., Claude L., Fernandez E., Rott P., Daugrois J.H., Antoine-Lorquin A., Bernardo P., Blouin A.G., Temple C., Kraberger S., Fontenele R.S., Harkins G.W., Ma Y., Marais A., Candresse T., Ben Chehida S., Lefeuvre P., Lett J.M., Varsani A., Massart S., Ogliastro M., Martin D.P., Filloux D., Roumagnac P.. 2023. In : 19e Rencontres de virologie végétale (RVV2023). Résumés. Aussois : SFV, p. 91. Rencontres de virologie végétale (RVV2023). 19, 2023-01-15/2023-01-19, Aussois (France).

Communication de congrès

Sugarcane mild mosaic virus recognized as a new ampelovirus species infecting sugarcane

Mollov D.S., Filloux D., Grinstead S., Bolus S., Claude L., Fernandez E., Julian C., Candresse T., Lockhart B.E.L., Roumagnac P., Rott P., Daugrois J.H.. 2023. In : 19e Rencontres de virologie végétale (RVV2023). Résumés. Aussois : SFV, p. 104. Rencontres de virologie végétale (RVV2023). 19, 2023-01-15/2023-01-19, Aussois (France).

Communication de congrès

Identification of a novel vitivirus from pineapple in Reunion Island

Massé D., Filloux D., Candresse T., Massart S., Marals A., Verdin E., Cassam N., Fernandez E., Roumagnac P., Teycheney P.Y., Lefeuvre P., Lett J.M.. 2022. Archives of Virology, 167 : p. 2355-2357.

DOI: 10.1007/s00705-022-05512-9

Article (a-revue à facteur d'impact)

Virion-associated nucleic acid-based metagenomics: A decade of advances in molecular characterization of plant viruses

Moubset O., François S., Maclot F., Palanga E., Julian C., Claude L., Fernandez E., Rott P., Daugrois J.H., Antoine-Lorquin A., Bernardo P., Blouin A.G., Temple C., Kraberger S., Fontenele R.S., Harkins G.W., Ma Y., Marais A., Candresse T., Ben Chehida S., Lefeuvre P., Lett J.M., Varsani A., Massart S., Ogliastro M., Martin D.P., Filloux D., Roumagnac P.. 2022. Phytopathology, 112 (11) : p. 2253-2272.

DOI: 10.1094/PHYTO-03-22-0096-RVW

Article (a-revue à facteur d'impact)

Towards a microbiota-based understanding of sugarcane health

Sanguin H., Sood S., Tournier E., Julian C., Fernandez E., Mahe F., Filloux D., Daugrois J.H., Roumagnac P., Rott P.. 2022. Sugar Journal (June) : p. 28-29. ASSCT 2022 Annual Meeting, 2022-06-21/2022-06-23, Bonita Springs (Etats-Unis).

Article (c-notoriété en attente de mise à jour)

Characterisation of the viral community associated with the Alfalfa Weevil (Hypera postica) and its host plant, Alfalfa (Medicago sativa)

François S., Antoine-Lorquin A., Kulikowski M., Frayssinet M., Filloux D., Fernandez E., Roumagnac P., Froissart R., Ogliastro M.. 2021. Viruses, 13 (5) : 17 p..

DOI: 10.3390/v13050791

Article (a-revue à facteur d'impact)

Comparison of the virome of quarantined sugarcane varieties and the virome of grasses growing near the quarantine station

Daugrois J.H., Filloux D., Julian C., Claude L., Ferdinand R., Fernandez E., Fontes H., Rott P., Roumagnac P.. 2021. Viruses, 13 (5) : 17 p..

DOI: 10.3390/v13050922

Article (a-revue à facteur d'impact)

Genome characterization and diversity of trifolium virus 1: identification of a novel legume-infecting capulavirus

Ma Y., Julian C., Galzi S., Fernandez E., Yvon M., Pirolles E., Lefebvre M., Filloux D., Roumagnac P., Candresse T.. 2021. Archives of Virology, 166 : p. 2573-2578.

DOI: 10.15454/1.5572369328961167E12

DOI: 10.1007/s00705-021-05135-6

Article (a-revue à facteur d'impact)

Nanopore sequencing is a credible alternative to recover complete genomes of geminiviruses

Ben Chehida S., Filloux D., Fernandez E., Moubset O., Hoareau M., Julian C., Blondin L., Lett J.M., Roumagnac P., Lefeuvre P.. 2021. Microorganisms, 9 : 15 p..

DOI: 10.3390/microorganisms9050903

Article (a-revue à facteur d'impact)

Improvements in virus detection at CIRAD's sugarcane quarantine using both viral metagenomics and PCR-Based approaches

Fernandez E., Ferdinand R., Filloux D., Guinet I., Julian C., Rott P., Roumagnac P., Daugrois J.H.. 2020. Sugar Tech, 22 : p. 498-503.

DOI: 10.1007/s12355-019-00790-1

Article (a-revue à facteur d'impact)

Molecular detection of sugarcane striate virus and sugarcane white streak virus and their prevalence in the Miami World Collection of sugarcane and related grasses

Boukari W., Filloux D., Daugrois J.H., Fernandez E., Mollov D.S., Kaye C., Hincapie M., Sanchez A., Wang J., Roumagnac P., Rott P.. 2020. Plant Pathology, 69 (6) : p. 1060-1069.

DOI: 10.1111/ppa.13192

Article (a-revue à facteur d'impact)

A new prevalent densovirus discovered in Acari. Insight from metagenomics in viral communities associated with two-spotted mite (Tetranychus urticae) populations

François S., Mutuel D., Duncan A.B., Rodrigues L.R., Danzelle C., Lefevre S., Santos I., Frayssinet M., Fernandez E., Filloux D., Roumagnac P., Froissart R., Ogliastro M.. 2019. Viruses, 11 (3) : 24 p..

DOI: 10.3390/v11030233

Article (a-revue à facteur d'impact)

Emergence of southern rice black-streaked dwarf virus in the centuries-old Chinese Yuanyang agrosystem of rice landraces

Alonso P., Gladieux P., Moubset O., Shih P.J., Mournet P., Frouin J., Blondin L., Ferdinand R., Fernandez E., Julian C., Filloux D., Adreit H., Fournier E., Ducasse A., Grosbois V., Morel J.B., Huang H., Jin B., He X., Martin D.P., Vernière C., Roumagnac P.. 2019. Viruses, 11 (11) : 13 p..

DOI: 10.3390/v11110985

Article (a-revue à facteur d'impact)

High-throughput sequencing of complete genomes of ipomoviruses associated with an epidemic of cassava brown streak disease in the Comoros Archipelago

Scussel S., Candresse T., Marais A., Claverie S., Hoareau M., Azali Hamza A., Verdin E., Tepfer M., Filloux D., Fernandez E., Roumagnac P., Robene I., Lefeuvre P., Jourda C., Roux-Cuvelier M., Lett J.M.. 2019. Archives of Virology, 164 (8) : p. 2193-2196.

DOI: 10.1007/s00705-019-04228-7

Article (a-revue à facteur d'impact)

Diversity and composition of arthropod pests' viral communities, and insights about pest viruses distribution in arthropod communities. [P.08]

François S., Kulikowski M., Frayssinet M., Filloux D., Fernandez E., Roumagnac P., Froissart R., Ogliastro M.. 2019. In : Livre des résumés des 17 ème Rencontres de virologie végétale. Aussois : INRA, p. 67-67. Rencontres de Virologie Végétale (RVV 2019). 17, 2019-01-27/2019-01-31, Aussois (France).

Communication de congrès

Exploring within-host diversity of plant viruses in rice agrosystems using two high-throughput sequencing strategies

Poulicard N., Dereeper A., Pinel-Galzi A., Fernandez E., Julian C., Hubert J., Filloux D., Fargette D., Roumagnac P., Hebrard E.. 2019. In : Livre des résumés des 17 ème Rencontres de virologie végétale. Aussois : INRA, p. 34-34. Rencontres de Virologie Végétale (RVV 2019). 17, 2019-01-27/2019-01-31, Aussois (France).

Communication de congrès

Improvements in virus detection at CIRAD's sugarcane quarantine using both viral metagenomics and PCR-based approaches

Fernandez E., Ferdinand R., Filloux D., Guinet I., Julian C., Rott P., Roumagnac P., Daugrois J.H.. 2019. In : Proceedings of the XXX International Society of Sugar Cane Technologists Congress. Tucuman : ISSCT, p. 345-351. ISSCT Congress. 30, 2019-09-02/2019-09-05, Tucuman (Argentine).

Communication de congrès

Nanopore-based detection and characterization of plant viruses. [P.14]

Filloux D., Fernandez E., Roumagnac P.. 2019. In : Livre des résumés des 17 ème Rencontres de virologie végétale. Aussois : INRA, p. 73-73. Rencontres de Virologie Végétale (RVV 2019). 17, 2019-01-27/2019-01-31, Aussois (France).

Communication de congrès

Nanopore-based detection and characterization of yam viruses

Filloux D., Fernandez E., Loire E., Claude L., Galzi S., Candresse T., Winter S., Jeeva M.L., Makeshkumar T., Martin D.P., Roumagnac P.. 2019. In : Livre des résumés des 17 ème Rencontres de virologie végétale. Aussois : INRA, p. 53-53. Rencontres de Virologie Végétale (RVV 2019). 17, 2019-01-27/2019-01-31, Aussois (France).

Communication de congrès

PCR-mediated sugarcane bacilliform virus detection for quarantine purpose. [P.39]

Daugrois J.H., Fernandez E., Filloux D.. 2019. In : Livre des résumés des 17 ème Rencontres de virologie végétale. Aussois : INRA, p. 98-98. Rencontres de Virologie Végétale (RVV 2019). 17, 2019-01-27/2019-01-31, Aussois (France).

Communication de congrès

Reverse transcriptase template switching: a method for without a priori amplification of full-length genome of positive-sense single-strand polyadenylated RNA plant viruses. [P.51]

Claude L., Fernandez E., Roumagnac P., Filloux D.. 2019. In : Livre des résumés des 17 ème Rencontres de virologie végétale. Aussois : INRA, p. 110-110. Rencontres de Virologie Végétale (RVV 2019). 17, 2019-01-27/2019-01-31, Aussois (France).

Communication de congrès

Comparison of loop-mediated isothermal amplification, polymerase chain reaction, and selective isolation assays for detection of Xanthomonas albilineans from sugarcane

Duarte Dias V., Fernandez E., Cunha M.G., Pieretti I., Hincapie M., Roumagnac P., Comstock J.C., Rott P.. 2018. Tropical Plant Pathology, 43 (4) : p. 351-359.

DOI: 10.1007/s40858-018-0216-2

Article (a-revue à facteur d'impact)

Geometagenomics illuminates the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale

Bernardo P., Charles-Dominique T., Barakat M., Ortet P., Fernandez E., Filloux D., Hartnady P., Rebelo T.A., Cousins S., Mesleard F., Cohez D., Yaverkovski N., Varsani A., Harkins G.W., Peterschmitt M., Malmstrom C., Martin D.P., Roumagnac P.. 2018. ISME Journal, 12 : p. 174-184.

DOI: 10.1038/ismej.2017.155

Article (a-revue à facteur d'impact)

Nanopore-based detection and characterization of yam viruses

Filloux D., Fernandez E., Loire E., Claude L., Galzi S., Candresse T., Winter S., Jeeva M.L., Makeshkumar T., Martin D.P., Roumagnac P.. 2018. Scientific Reports, 8 : 11 p..

DOI: 10.1038/s41598-018-36042-7

Article (a-revue à facteur d'impact)

Viral metagenomic-based screening of sugarcane from florida reveals occurrence of six sugarcane-infecting viruses and high prevalence of Sugarcane yellow leaf virus

Filloux D., Fernandez E., Comstock J.C., Mollov D.S., Roumagnac P., Rott P.. 2018. Plant Disease, 102 (11) : p. 2317-2323.

DOI: 10.1094/PDIS-04-18-0581-RE

Article (a-revue à facteur d'impact)

Viral metagenomics approaches for high-resolution screening of multiplexed arthropod and plant viral communities

François S., Filloux D., Fernandez E., Ogliastro M., Roumagnac P.. 2018. In : Pantaleo Vitantonio (ed.), Chiumenti Michela (ed.). Viral metagenomics: methods and protocols. New York : Humana Press, p. 77-95. (Methods in Molecular Biology, 1746).

DOI: 10.1007/978-1-4939-7683-6_7

Chapitre d'ouvrage

Étude de la diversité des virus des plantes conservés dans les herbiers

Delattre R., Julian C., Fernandez E., Filloux D., Roumagnac P.. 2018. In : Actes de conférences : Le printemps de Baillarguet. Montpellier : CIRAD, p. 12-12. Le printemps de Baillarguet 2018. 10, 2018-05-28/2018-05-29, Montpellier.

Communication de congrès

Exploring within-host diversity of plant viruses in rice agrosystems using two high-throughput sequencing strategies

Poulicard N., Dereeper A., Pinel-Galzi A., Fernandez E., Julian C., Hubert J., Filloux D., Fargette D., Roumagnac P., Hebrard E.. 2018. In : Book of abstract of the International Phytobiomes Conference 2018. Montpellier : International Phytobiomes Alliance; INRA, p. 68-68. International phytobiomes conference. 2, 2018-12-04/2018-12-06, Montpellier (France).

Communication de congrès

Genomic characterization of sugarcane mild mosaic virus

Filloux D., Fernandez E., Mollov D.S., Julian C., Rott P., Roumagnac P., Daugrois J.H.. 2018. In : Book of Abstracts XII ISSCT Pathology Workshop. Coimbatore : ISSCT, p. 26-27. ISSCT Pathology Workshop. 12, 2018-09-03/2018-09-07, Coimbatore (Inde).

Communication de congrès

Geometagenomics illuminates the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale. O13

Bernardo P., Charles-Dominique T., Barakat M., Ortet P., Fernandez E., Filloux D., Hartnady P., Rebelo T.A., Cousins S., Mesleard F., Cohez D., Yaverkovski N., Varsani A., Harkins G.W., Peterschmitt M., Malmstrom C., Martin D.P., Roumagnac P.. 2018. In : Book of abstract Pathobiome 2018. Ajaccio : INRA, p. 25-26. Pathobiome, 2018-03-18/2018-03-20, Ajaccio (France).

Communication de congrès

Identification of two SCYLV recombinants between different genotypes in the germplasm collection of Guadeloupe

Fernandez E., Filloux D., Julian C., Roumagnac P., Daugrois J.H.. 2018. In : Book of Abstracts XII ISSCT Pathology Workshop. Coimbatore : ISSCT, p. 28-28. ISSCT Pathology Workshop. 12, 2018-09-03/2018-09-07, Coimbatore (Inde).

Communication de congrès

Relationship between rice genetic diversity and microbiota composition in traditional Yuanyang rice terraces of China. P1

Filloux D., Ferdinand R., Fernandez E., Huang H., Jin B., He X., Ali S., Vernière C., Roumagnac P.. 2018. In : Book of abstract Pathobiome 2018. Ajaccio : INRA, p. 32-32. Pathobiome, 2018-03-18/2018-03-20, Ajaccio (France).

Communication de congrès

Rice genetic diversity and microbiome characterization of a centuries-old Chinese rice agro-system

Alonso P., Filloux D., Blondin L., Mahé F., Fournier E., Gladieux P., Ducasse A., Morel J.B., Mournet P., Huang H., Jin B., He X., Ferdinand R., Fernandez E., Vernière C., Roumagnac P.. 2018. In : Book of abstract of the International Phytobiomes Conference 2018. Montpellier : International Phytobiomes Alliance; INRA, p. 48-48. International phytobiomes conference. 2, 2018-12-04/2018-12-06, Montpellier (France).

Communication de congrès

Visacane sugarcane quarantine and its partner networks

Fernandez E., Thong-Chane A., Barau L., Filloux D., Guinet-Brial I., Mollow D., Julian C., Ferdinand R., Roumagnac P., Daugrois J.H.. 2018. In : Rao G.P. (ed;), Solomon S. (ed.), Li Yang-Rui (ed.), Swapna M. (ed.), Sinh Priyanka (ed.), Tiwari Ajay (ed.), Vanichsriratana Wirat (ed.), Uraichuen Sopon (ed.). Sugar crops improvement, biotechnology, Bio-refinery and diversification: Impacts on bio-based economy: 6th IAPSIT International Sugar Conference. Souvenir de presentation IS-2018. Udon Thani : TSSCT; IAPSIT, p. 52-52. IAPSIT International Sugar Conference. 6, 2018-03-06/2018-03-09, Udon Thani (Thaïlande).

Communication de congrès

Occurrence of a novel mastrevirus in sugarcane germplasm collections in Florida, Guadeloupe and Réunion

Boukari W., Alcala-Briseño R.I., Kraberger S., Fernandez E., Filloux D., Daugrois J.H., Comstock J.C., Lett J.M., Martin D.P., Varsani A., Roumagnac P., Polston J.E., Rott P.. 2017. Virology Journal, 14 : 8 p..

DOI: 10.1186/s12985-017-0810-9

Article (a-revue à facteur d'impact)

Metagenomics-based discovery and molecular characterization of a novel sugarcane mastrevirus. [P13]

Fernandez E., Boukari W., Alcala-Briseño R.I., Kraberger S., Filloux D., Lett J.M., Lefeuvre P., Comstock J.C., Daugrois J.H., Varsani A., Polston J.E., Rott P., Roumagnac P.. 2017. In : Livre des résumés des 16 ème Rencontres de virologie végétale. Aussois : CIRAD; CNRS, p. 74-74. Rencontres de virologie végétale, 2017-01-15/2017-01-19, Aussois (France).

Communication de congrès

Metagenomics-based discovery and molecular characterization of novel geminiviruses from two Mediterranean-climate biodiversity hotspots. [P57]

Galzi S., Bernardo P., Fernandez E., Julian C., Ferdinand R., Harkins G.W., Peterschmitt M., Martin D.P., Filloux D., Roumagnac P.. 2017. In : Livre des résumés des 16 ème Rencontres de virologie végétale. Aussois : CIRAD; CNRS, p. 118-118. Rencontres de virologie végétale, 2017-01-15/2017-01-19, Aussois (France).

Communication de congrès

Spatial metagenomics illuminate the impact of agriculture on the distribution and prevalence of plant viruses at the ecosystem scale

Roumagnac P., Bernardo P., Charles-Dominique T., Fernandez E., Filloux D., Ortet P., Barakat M., Rebelo T.A., Cousins S., Mesleard F., Cohez D., Yaverkovski N., Varsani A., Harkins G.W., Peterschmitt M., Malmstrom C.M., Martin D.P.. 2017. Paris : INRA, p. 93-93. International Conference on Holobionts, 2017-04-19/2017-04-21, Paris (France).

Communication de congrès

Sugarcane mild mosaic virus: towards the full characterization of this sugarcane Ampelovirus re-discovered using metagenomics-based approaches. [P03]

Daugrois J.H., Candresse T., Fernandez E., Filloux D., Julian C., Teycheney P.Y., Mollov D.S., Roumagnac P.. 2017. In : Livre des résumés des 16 ème Rencontres de virologie végétale. Aussois : CIRAD; CNRS, p. 64-64. Rencontres de virologie végétale, 2017-01-15/2017-01-19, Aussois (France).

Communication de congrès

Using preserved herbarium specimens to analyse past viral diversity: preliminary methodological results. [P53]

Julian C., Fernandez E., Lefeuvre P., Lett J.M., Bernardo P., Malmstrom C.M., Martin D.P., Filloux D., Roumagnac P.. 2017. In : Livre des résumés des 16 ème Rencontres de virologie végétale. Aussois : CIRAD; CNRS, p. 114-114. Rencontres de virologie végétale, 2017-01-15/2017-01-19, Aussois (France).

Communication de congrès

Viral metagenomics-based approach to uncover mastreviruses diversity within Reunion Island's agroecological interfaces. [P50]

Claverie S., Ouattara A., Hoareau M., Hascoat J., Lebreton G., Grondin M., Fernandez E., Filloux D., Roumagnac P., Lett J.M., Lefeuvre P.. 2017. In : Livre des résumés des 16 ème Rencontres de virologie végétale. Aussois : CIRAD; CNRS, p. 111-111. Rencontres de virologie végétale, 2017-01-15/2017-01-19, Aussois (France).

Communication de congrès

Metagenomic-based screening and molecular characterization of cowpea-infecting viruses in Burkina Faso

Palanga E., Filloux D., Martin D.P., Fernandez E., Gargani D., Ferdinand R., Zabré J., Bouda Z., Neya B., Sawadogo M., Traoré O., Peterschmitt M., Roumagnac P.. 2016. PloS One, 11 (10) : 21 p..

DOI: 10.1371/journal.pone.0165188

Article (a-revue à facteur d'impact)

Molecular characterization and prevalence of two capulaviruses: Alfalfa leaf curl virus from France and Euphorbia caput-medusae latent virus from South Africa

Bernardo P., Muhire B., François S., Deshoux M., Hartnady P., Farkas K., Kraberger S., Filloux D., Fernandez E., Galzi S., Ferdinand R., Granier M., Marais A., Monge Blasco P., Candresse T., Escriu F., Varsani A., Harkins G.W., Martin D.P., Roumagnac P.. 2016. Virology, 493 : p. 142-153.

DOI: 10.1016/j.virol.2016.03.016

Article (a-revue à facteur d'impact)

Prevalence of Sugarcane yellow leaf virus in sugarcane producing regions in Kenya revealed by reverse transcription loop-mediated isothermal amplification method

Amata R.L., Fernandez E., Filloux D., Martin D.P., Rott P., Roumagnac P.. 2016. Plant Disease, 100 (2) : p. 260-268.

DOI: 10.1094/PDIS-05-15-0602-RE

Article (a-revue à facteur d'impact)

Deciphering plant-associated viruses at the agroecosystem scale using geometagenomics

Charles-Dominique T., Fernandez E., Filloux D., Ortet P., Barakat M., Rebelo T.A., Varsani A., Malmstrom C.M., Martin D.P., Roumagnac P.. 2016. Helsinki : University of Helsinki, 1 p.. International Meeting on Wild Plant Pathosystems. 2, 2016-08-29/2016-08-31, Helsinki (Finlande).

Communication de congrès

Identification of a new Mastrevirus of Saccharum barberi, Saccharum officinarum and Saccharum spontaneum in Florida

Boukari W., Alcala-Briseño R.I., Kraberger S., Fernandez E., Filloux D., Comstock J.C., Varsani A., Roumagnac P., Polston J.E., Rott P.. 2016. Tampa : s.n., p. 1-2. APS annual meeting, 2016-07-30/2016-08-03, Tampa (Etats-Unis).

Communication de congrès

Metagenomics-based exploration of the genetic diversity of SCYLV in the sugarcane collection of Guadeloupe

Fernandez E., Filloux D., Julian C., Lubin Adjanoh N., Teycheney P.Y., Candresse T., Roumagnac P., Daugrois J.H.. 2016. In : Building bridges between disciplines for sustainable management of plant virus diseases. Avignon : INRA, p. 83. International Plant Virus Epidemiology Symposium. 13, 2016-06-06/2016-06-10, Avignon (France).

Communication de congrès

Visacane, an overview of the distribution of disease-free sugarcane varieties for the last 10 years

Guinet-Brial I., Bousquet J.F., Darroussat M.J., Fernandez E., Daugrois J.H.. 2016. In : Proceedings of the 29th Congress of the International Society of Sugar Cane Technologists. Chiang Mai : ISSCT, p. 58-62. ISSCT Congress. 29, 2016-12-05/2016-12-08, Chiang Mai (Thaïlande).

Communication de congrès

Alfalfa leaf curl virus: an aphid-transmitted geminivirus

Roumagnac P., Granier M., Bernardo P., Deshoux M., Ferdinand R., Galzi S., Fernandez E., Julian C., Abt I., Filloux D., Mesleard F., Varsani A., Blanc S., Martin D.P., Peterschmitt M.. 2015. Journal of Virology, 89 (18) : p. 9683-9688.

DOI: 10.1128/JVI.00453-15

Article (a-revue à facteur d'impact)

Metagenomic analysis of the sugarcane virome in Florida reveals prevalent and potential novel viruses

Fernandez E., Filloux D., Comstock J.C., Roumagnac P., Rott P.. 2015. Phytopathology, 105 (11S) : p. S4.43. 2015 APS Annual Meeting, 2015-08-01/2015-08-05, Pasadena (Etats-Unis).

Article (a-revue à facteur d'impact)

Visacane: An innovative quarantine tool for the exchange of pest and disease-free sugarcane germplasm

Guinet-Brial I., Girard J.C., Roumagnac P., Daugrois J.H., Fernandez E., Rott P.. 2015. International Sugar Journal : p. 890-896.

Article (a-revue à facteur d'impact)

Detection of Xanthomonas albilineans in sugarcane stalks using lamp PCR and selective isolation assays

Duarte Dias V., Fernandez E., Da Cunha M.G., Roumagnac P., Comstock J.C., Rott P.. 2015. In : Book of abstracts. XI Pathology and IX Entomology ISSCT joint Workshop. Guayaquil : FIADE, p. 26-26. ISSCT Pathology Workshop. 11, 2015-09-14/2015-09-18, Guayaquil (Equateur).

Communication de congrès

Impact of NGS-based diagnosis on sugarcane quarantine processes

Daugrois J.H., Darroussat M.J., Fenouillet C., Ferdinand R., Fernandez E., Filloux D., Galzi S., Guinet-Brial I., Julian C., Lubin N., Roques D., Roumagnac P.. 2015. In : Book of abstracts. XI Pathology and IX Entomology ISSCT joint Workshop. Guayaquil : FIADE, p. 17-17. ISSCT Pathology Workshop. 11, 2015-09-14/2015-09-18, Guayaquil (Equateur).

Communication de congrès

Looking for the vector of the latest discovered geminivirus genus, Capulavirus. [P.48]

Bernardo P., Deshoux M., Granier M., Ferdinand R., Galzi S., Fernandez E., Blanc S., Filloux D., Peterschmitt M., Roumagnac P.. 2015. In : CIRAD ; IRD. 15èmes Rencontres de Virologie Végétale, Aussois, France, 18-22 janvier 2015. s.l. : s.n., p. 106-106. Rencontres de virologie végétale. 15, 2015-01-18/2015-01-22, Aussois (France).

Communication de congrès

Metagenomic discovery, worldwide distribution and genetic diversity of novel macluraviruses infecting yams (Dioscorea spp.). [P.28]

Filloux D., Bonheur L., Umber M., Pavis C., Fernandez E., Galzi S., Julian C., Daugrois J.H., Sukal A., Winter S., Teycheney P.Y., Candresse T., Roumagnac P.. 2015. In : CIRAD ; IRD. 15èmes Rencontres de Virologie Végétale, Aussois, France, 18-22 janvier 2015. s.l. : s.n., p. 86-86. Rencontres de virologie végétale. 15, 2015-01-18/2015-01-22, Aussois (France).

Communication de congrès

Metagenomic screening of the sugarcane virome in Florida. [P.36]

Fernandez E., Filloux D., Comstock J.C., ElSayed A., Roumagnac P., Rott P.. 2015. In : CIRAD ; IRD. 15èmes Rencontres de Virologie Végétale, Aussois, France, 18-22 janvier 2015. s.l. : s.n., p. 94-94. Rencontres de virologie végétale. 15, 2015-01-18/2015-01-22, Aussois (France).

Communication de congrès

Metagenomics-based detection of viruses infecting cowpea in Burkina-Faso. [P.30]

Palanga E., Fernandez E., Filloux D., Ferdinand R., Bouma Neya J., Sawadogo M., Traoré O., Peterschmitt M., Roumagnac P.. 2015. In : CIRAD ; IRD. 15èmes Rencontres de Virologie Végétale, Aussois, France, 18-22 janvier 2015. s.l. : s.n., p. 88-88. Rencontres de virologie végétale. 15, 2015-01-18/2015-01-22, Aussois (France).

Communication de congrès

Viral treasure hunt in European outermost territories: how metagenomics boosts the discovery of novel viral species in tropical and sub-tropical crops germplasm. [O.18]

Teycheney P.Y., Bandou E., Gomez R.M., Lange D., Pavis C., Umber M., Acina Manbole I.N., Bonheur L., Daugrois J.H., Fernandez E., Filloux D., Julian C., Roumagnac P., Grisoni M., Pierret A., Rubington M., Candresse T., Contreras S., Faure C., Marais A., Theil S., Da Câmara Machado A., Mendonça D., Pinheiro de Carvalho M.A.A., Silva E.. 2015. In : CIRAD ; IRD. 15èmes Rencontres de Virologie Végétale, Aussois, France, 18-22 janvier 2015. s.l. : s.n., p. 30-30. Rencontres de virologie végétale. 15, 2015-01-18/2015-01-22, Aussois (France).

Communication de congrès

Visacane, an up to date Cirad quarantine tool for exchanging disease-free sugarcane varieties in compliance with property rights. [BO24]

Guinet-Brial I., Daugrois J.H., Bousquet J.F., Darroussat M.J., Fernandez E., Ferdinand R.. 2015. In : Pushing the frontiers of sugarcane improvement. Saint-Gilles : ISSCT, p. 28-28. Germplasm and Breeding ISSCT Workshop. 11, 2015-06-01/2015-06-05, Saint-Gilles (Réunion).

Communication de congrès

Appearances can be deceptive: Revealing a hidden viral infection with deep sequencing in a plant quarantine Context

Candresse T., Filloux D., Muhire B., Julian C., Galzi S., Fort G., Bernardo P., Daugrois J.H., Fernandez E., Martin D.P., Varsani A., Roumagnac P.. 2014. PloS One, 9 (7) : 13 p..

DOI: 10.1371/journal.pone.0102945

Article (a-revue à facteur d'impact)

Visacane, the Cirad quarantine tool for the exchange of pest and disease-free sugarcane germplasm

Guinet-Brial I., Girard J.C., Roumagnac P., Daugrois J.H., Fernandez E., Rott P.. 2014. In : Yang-Rui Li, G.P. Rao, S. Solomon, Li-Tao Yang, Zhong Liu, Wei-Zhong He,. 5th IAPSIT International Sugar Conference (IS-2014) onThe Green Technologies for Sustainable growth of Sugar Industry in Developing Countries, November 25-28, 2014, Nanning, China. Naming : IAPSIT, p. 363-363. IAPSIT International Sugar Conference IS-2014. 5, 2014-11-25/2014-11-28, Nanning (Chine).

Communication de congrès

Identification and characterisation of a highly divergent geminivirus: Evolutionary and taxonomic implications

Bernardo P., Golden M., Akram M., Naimuddin, Nadarajan N., Fernandez E., Granier M., Rebelo A., Peterschmitt M., Martin D.P., Roumagnac P.. 2013. Virus Research, 177 (1) : p. 35-45.

DOI: 10.1016/j.virusres.2013.07.006

Article (a-revue à facteur d'impact)

Characterization of novel, highly divergent geminiviruses and insights into the evolutionary history of geminiviruses

Bernardo P., Ortet P., Barakat M., Rebelo A., Cousins S., Fernandez E., Mesleard F., Peterschmitt M., Filloux D., Varsani A., Martin D.P., Roumagnac P.. 2013. In : 7th International Geminvirus Symposium and 5th International ssDNA Comparative Virology Workshop, Hangzhou, China, November 3-9, 2013. s.l. : s.n., 1 p.. International Geminvirus Symposium. 7, 2013-11-03/2013-11-09, Hangzhou (Chine).

Communication de congrès

Detection of Sugarcane yellow leaf virus by a novel reverse transcription loop-mediated isothermal amplification method from three sugarcane production regions in Kenya

Fernandez E., Amata R.L., Roumagnac P.. 2013. In : Marais Armelle (ed.), Revers Frédéric (ed.). 14èmes Rencontres de virologie végétale (RVV 2013) : Aussois, France, 13-17 janvier 2013. Paris : SFP, p. 71-71. Rencontres de Virologie Végétale. 14, 2013-01-13/2013-01-17, Aussois (France).

Communication de congrès

Development of the loop mediated isothermal amplification (LAMP) method for detection of Cauliflower mosaic virus

Fernandez E., Ouvray C., Roumagnac P., Froissart R.. 2013. In : 1st International Conference Wild Plant Pathosystems (WPP 2013), Olomouc, République Tchèque, 2-5 July 2013. s.l. : s.n., 1 p.. International Conference Wild Plant Pathosystems, 2013-07-02/2013-07-05, Olomouc (Tchèque, République).

Communication de congrès

Diverse circular single-stranded DNA viruses discovered from research greenhouses and agro-ecosystems

Fort G., Bernardo P., Fernandez E., Galzi S., Filloux D., Roumagnac P.. 2013. In : Marais Armelle (ed.), Revers Frédéric (ed.). 14èmes Rencontres de virologie végétale (RVV 2013) : Aussois, France, 13-17 janvier 2013. Paris : SFP, p. 66-66. Rencontres de Virologie Végétale. 14, 2013-01-13/2013-01-17, Aussois (France).

Communication de congrès

Geo-metagenomics: deciphering the spatial biodiversity of plant viruses associated with the unique fynbos ecosystem of Southern Africa and its neighbouring agro-ecosystem

Bernardo P., Ortet P., Barakat M., Rebelo A., Cousins S., Fernandez E., Peterschmitt M., Filloux D., Varsani A., Martin D.P., Roumagnac P.. 2013. In : EMBO Workshop Green Viruses, from Gene to Landscape, 7-11 September 2013, Hyères-les-Palmiers, France : programme and abstracts book. s.l. : s.n., p. 43-43. EMBO Workshop Green Viruses, from Gene to Landscape, 2013-09-07/2013-09-11, Hyères-les-Palmier (France).

Communication de congrès

Geo-metagenomics: deciphering the spatial biodiversity of ssDNA viruses associated with Western Cape and Camargue agroecosystems

Bernardo P., Ortet P., Barakat M., Rebelo A., Cousins S., Fernandez E., Mesleard F., Peterschmitt M., Filloux D., Varsani A., Martin D.P., Roumagnac P.. 2013. In : 7th International Geminvirus Symposium and 5th International ssDNA Comparative Virology Workshop, Hangzhou, China, November 3-9, 2013. s.l. : s.n., 1 p.. International Geminvirus Symposium. 7, 2013-11-03/2013-11-09, Hangzhou (Chine).

Communication de congrès

Improvement of three nucleic acid isolation protocols for an overall diagnosis of viruses on six vegetative propagated plants

Julian C., Bernardo P., Fernandez E., Galzi S., Grisoni M., Da Silva Mendoça D.M., Pavis C., Roumagnac P., Filloux D.. 2013. In : Marais Armelle (ed.), Revers Frédéric (ed.). 14èmes Rencontres de virologie végétale (RVV 2013) : Aussois, France, 13-17 janvier 2013. Paris : SFP, p. 75-75. Rencontres de Virologie Végétale. 14, 2013-01-13/2013-01-17, Aussois (France).

Communication de congrès

Molecular characterization of Euphorbia caput-medusae stunt virus: Evidence for the existence of a new genus within the family Geminiviridae

Bernardo P., Fernandez E., Granier M., Golden M., Rebelo T.A., Peterschmitt M., Martin D.P., Roumagnac P.. 2013. In : Marais Armelle (ed.), Revers Frédéric (ed.). 14èmes Rencontres de virologie végétale (RVV 2013) : Aussois, France, 13-17 janvier 2013. Paris : SFP, p. 9-9. Rencontres de Virologie Végétale. 14, 2013-01-13/2013-01-17, Aussois (France).

Communication de congrès

New insights into the evolutionary history of geminiviruses derived through the discovery of divergent viruses isolated from wild plants

Bernardo P., Golden M., Mohd A., Fernandez E., Granier M., Rebelo A.G., Peterschmitt M., Martin D.P., Roumagnac P.. 2013. In : 1st International Conference Wild Plant Pathosystems (WPP 2013), Olomouc, République Tchèque, 2-5 July 2013. s.l. : s.n., 1 p.. International Conference Wild Plant Pathosystems, 2013-07-02/2013-07-05, Olomouc (Tchèque, République).

Communication de congrès

Pathology and viral metagenomics, a recent history

Bernardo P., Fernandez E., Filloux D., Albina E., Eloit M., Roumagnac P.. 2013. In : Marais Armelle (ed.), Revers Frédéric (ed.). 14èmes Rencontres de virologie végétale (RVV 2013) : Aussois, France, 13-17 janvier 2013. Paris : SFP, p. 20-20. Rencontres de Virologie Végétale. 14, 2013-01-13/2013-01-17, Aussois (France).

Communication de congrès

Visacane: an innovative quarantine tool for the exchange of pest and disease-free sugarcane germplasm

Guinet-Brial I., Girard J.C., Roumagnac P., Daugrois J.H., Fernandez E., Rott P.. 2013. In : Brazilian Society of Sugar and Ethanol Technologists (STAB) ; XXVIIIth ISSCT Organising Committee. Proceedings of the XXVIII ISSCT (International Society of Sugar Cane Technologists) Congress, São Paulo, Brazil 2013 june 24-27. s.l. : D.M. HOGARTH, p. 190-190. ISSCT Congress. 28, 2013-06-24/2013-06-27, São Paulo (Brésil).

Communication de congrès

Genetic diversity of sugarcane yellow leaf virus in a sugarcane selection plot in Guadeloupe (FWI)

Girard J.C., Fernandez E., Daugrois J.H., Roques D., Roumagnac P., Rott P.. 2012. International Sugar Journal, 114 (1358) : p. 104-108. ISSCT Congress. 27, 2010-03-07/2010-03-11, Veracruz (Mexique).

Article (a-revue à facteur d'impact)

Development of the loop mediated isothermal amplification (LAMP) method for detection of Sugarcane yellow leaf virus

Fernandez E., Amata R.L., Rott P., Roumagnac P.. 2012. In : 10th Pathology Workshop. Understanding sugar cane diseases for their efficient management, 07-11 May 2012, Nanning, China. s.l. : s.n., p. 60-60. ISSCT Pathology Workshop. 10, 2012-05-07/2012-05-11, Nanning (Chine).

Communication de congrès

A new genus-level geminivirus lineage isolated from the South African fynbos

Bernardo P., Fernandez E., Granier M., Urbino C., Peterschmitt M., Martin D.P., Roumagnac P.. 2011. In : 4th Plant Virus Ecology Network Workshop (PVEN), Montpellier, France, May 30 to June 1, 2011. s.l. : s.n., 1 p.. Plant Virus Ecology Network Workshop. 4, 2011-05-30/2011-06-01, Montpellier (France).

Communication de congrès

Biotic and abiotic factors altogether affect the spread of the vectored emerging disease, Yellow leaf of sugarcane, in Guadeloupe.

Daugrois J.H., Edon-Jock C., Fernandez E.. 2011. In : 4th Plant Virus Ecology Network Workshop (PVEN), Montpellier, France, May 30 to June 1, 2011. s.l. : s.n., 1 p.. Plant Virus Ecology Network Workshop. 4, 2011-05-30/2011-06-01, Montpellier (France).

Communication de congrès

Exploration sans a priori de la biodiversité phytovirale de l'igname (Dioscorea spp.) en serre de quarantaine

Filloux D., Galzi S., Fernandez E., Roumagnac P.. 2011. In : SFP. 13èmes Rencontres de virologie végétale (RVV 2011), Aussois, France, 16-20 janvier 2011. s.l. : s.n., 1 p.. Rencontres de virologie végétale. 13, 2011-01-16/2011-01-20, Aussois (France).

Communication de congrès

Géo-métagénomique. Déchiffrer la biodiversité spatiale des phytovirus associés à des agro-écosystèmes tropicaux et méditerranéens

Fernandez E., Galzi S., Filloux D., Girard J.C., Martin D.P., Roumagnac P.. 2011. In : SFP. 13èmes Rencontres de virologie végétale (RVV 2011), Aussois, France, 16-20 janvier 2011. s.l. : s.n., 1 p.. Rencontres de virologie végétale. 13, 2011-01-16/2011-01-20, Aussois (France).

Communication de congrès

Visacane, an innovative quarantine tool for the exchange of pest and disease-free sugarcane germplasm

Girard J.C., Guinet I., Roumagnac P., Fernandez E., Rott P.. 2011. In : 10th Germplasm and Breeding, and 7th Molecular Biology Workshop, Maceió, Brazil, 15-20 May 2011 : Breaking breeding and biotechnology paradigms - towards a complementary approach in sugar cane research. Abstract. Réduit : ISSCT, p. 27-27. ISSCT Germplasm and Breeding Workshop. 10, 2011-05-15/2011-05-20, Maceio (Brésil).

Communication de congrès

Genetic diverstiy of Sugarcane yellow leaf virus in a sugarcane selection plot in Guadeloupe (FWI)

Girard J.C., Fernandez E., Daugrois J.H., Roques D., Roumagnac P., Rott P.. 2010. In : ISSCT. ISSCT 2010: 27th Congress of the International Society of Sugar Cane Technologists Congres, Veracruz, Mexique, 7-11 mars 2010. s.l. : s.n., 9 p.. ISSCT Congress. 27, 2010-03-07/2010-03-11, Veracruz (Mexique).

Communication de congrès

Metagenomics and quarantine: searching for the unknown

Roumagnac P., Fernandez E.. 2010. In : 3rd Plant Virus Ecology Network (PVEN) Workshop, Ithaca, USA, June 20-24, 2010. s.l. : s.n., 1 p.. Plant Virus Ecology Network Workshop. 3, 2010-06-20/2010-06-24, Ithaca (Etats-Unis).

Communication de congrès

Variation in sugarcane cultivar host range of Sugarcane yellow leaf virus genotypes in Guadeloupe

Daugrois J.H., Débibakas S., Fernandez E., Girard J.C., Rott P.. 2010. In : Building bridges between disciplines for sustainable management of plant virus diseases. s.l. : s.n., 1 p.. International Plant Virus Epidemiology Symposium. 11, 2010-06-20/2010-06-24, Ithaca (Etats-Unis).

Communication de congrès

Metagenomics and quarantine: searching for the unknown

Roumagnac P., Fernandez E.. 2009. In : Jacques Monod. Understanding emergence of infectious diseases: focus on New Experimental and Theoretical Approaches to Virus Evolution = Maladies infectieuses émergentes : focus sur les nouvelles approches expérimentales et théoriques de l'évolution virale. s.l. : s.n., 1 p.. Jacques Monod Conférences, 2009-09-26/2009-09-30, Roscoff (France).

Communication de congrès

Mosaic diseases in sugarcane

Rott P., Fernandez E., Girard J.C.. 2008. In : Rao Govind P. (ed.), Paul Khurana S.M. (ed.), Lenardon Sergio L. (ed.). Characterization, diagnosis and management of plant viruses. Industrial crops. Houston : Studium Press LLC, p. 99-110. (Plant pathogens series, 1).

Chapitre d'ouvrage

Improved detection of sugarcane yellow leaf based on genetic diversity studies of Sugarcane yellow leaf virus

Girard J.C., Fernandez E., Royer M., Daugrois J.H., Edon-Jock C., Rott P.. 2008. In : ISSCT ; CENICANA. Advances and challenges in sugarcane biotechnology and plant pathology : proceedings : Joint ISSCT IX Plant Pathology and VI Molecular Biology Workshop, Cali, Colombia, 23-27 june 2008. Cali : ISSCT, 1 p.. ISSCT Plant Pathology Workshop. 9, 2008-06-23/2008-06-27, Cali (Colombie).

Communication de congrès

Modern tools for safe detection of diseases in sugarcane quarantine

Girard J.C., Fernandez E., Royer M., Rott P.. 2008. In : 3rd International IAPIST Conference. Meeting the Challenges of Sugar Crops and Integrated Industrin Developing Countries, 11-14 September 2008, AI Arish, Egypt. s.l. : s.n., p. 439-439. International IAPIST Conference. 3, 2008-09-11/2008-09-14, Al Arish (Egypte).

Communication de congrès

Status of sugar cane yellow leaf disease in the French West Indies and in other islands of the Carribean

Daugrois J.H., Edon-Jock C., Fernandez E., Girard J.C., Rott P.. 2008. In : Proceedings of the XXIX West Indies Sugar Technologists' Association Conference. Montego Bay : Sugar Association of the Caribbean, 6 p.. West Indies Sugar Technologists' Conference. 29, 2008-04-21/2008-04-28, Montego Bay (Jamaïque).

Communication de congrès

Variation of sugar cane yellow leaf disease status in the French West Indies

Daugrois J.H., Edon-Jock C., Fernandez E., Girard J.C., Rott P.. 2008. In : ISSCT ; CENICANA. Advances and challenges in sugarcane biotechnology and plant pathology : proceedings : Joint ISSCT IX Plant Pathology and VI Molecular Biology Workshop, Cali, Colombia, 23-27 june 2008. Cali : ISSCT, 1 p.. ISSCT Plant Pathology Workshop. 9, 2008-06-23/2008-06-27, Cali (Colombie).

Communication de congrès

Compte-rendu de mission en pathologie de la canne à sucre à la compagnie Sucrière Sénégalaise : du 10 au 15 novembre 2008

Fernandez E.. 2008. La Haye : CIR, 17 p..

Rapport de mission

Variation in virus populations and growth characteristics of two sugarcane cultivars naturally infected by Sugarcane yellow leaf virus in different geographical locations

Abu Ahmad Y., Girard J.C., Fernandez E., Pauquet J., Lockhart B.E.L., Letourmy P., Rott P.. 2007. Plant Pathology, 56 (5) : p. 743-754.

DOI: 10.1111/j.1365-3059.2007.01617.x

Article (a-revue à facteur d'impact)

Impact of genetic diversity of sugarcane yellow leaf virus on diagnosis of surgarcane yellow leaf and germplasm movement

Girard J.C., Fernandez E., Royer M., Edon-Jock C., Abu Ahmad Y., Daugrois J.H., Rott P.. 2007. In : Indian Virological Society. International Conference on Emerging and Re-Emerging Viral Diseases of the Tropics and Sub-Tropics, December 11-14, 2007, New Delhi. s.l. : s.n., p. 143-143. International Conference on Emerging and Re-Emerging Viral Diseases of the Tropics and Sub-Tropics, 2007-12-11/2007-12-14, New Delhi (Inde).

Communication de congrès

Status of sugarcane yellow leaf virus in commercial fields and risk assessment in Guadeloupe

Edon-Jock C., Rott P., Vaillant J., Fernandez E., Girard J.C., Daugrois J.H.. 2007. In : ISSCT 2007: 26th Congress of the International Society of Sugar Cane Technologists Congress, 29 juillet - 2 août 2007, Durban, South Africa. Réduit : ISSCT, p. 995-1004. ISSCT Congress. 26, 2007-07-29/2007-08-02, Durban (Afrique du Sud).

Communication de congrès

First report of Leifsonia xyli subsp. xyli, causal agent of ratoon stunting of sugarcane, in Jamaica

Falloon T., Henry E., Davis M.J., Fernandez E., Girard J.C., Rott P., Daugrois J.H.. 2006. Plant Disease, 90 (2) : p. 245-245.

DOI: 10.1094/PD-90-0245B

Article (a-revue à facteur d'impact)

Molecular diagnosis and genetic diversity of the causal agents of mosaic and streak mosaic of sugarcane

Fernandez E., Girard J.C., Royer M., Rott P.. 2006. In : Daugrois Jean-Heinrich. VIIIth ISSCT Pathology Workshop Petit-Bourg, Guadeloupe (FWI), 23-27 January 2006, programme and abstracts. Réduit : ISSCT. ISSCT Pathology Workshop. 8, 2006-01-23/2006-01-27, Petit-Bourg (Guadeloupe).

Communication de congrès

The sugarcane quarantine of CIRAD in Montpellier, France : from disease diagnosis to fundamental research and vice versa

Girard J.C., Fernandez E., Rott P.. 2006. In : Daugrois Jean-Heinrich. VIIIth ISSCT Pathology Workshop Petit-Bourg, Guadeloupe (FWI), 23-27 January 2006, programme and abstracts. Réduit : ISSCT. ISSCT Pathology Workshop. 8, 2006-01-23/2006-01-27, Petit-Bourg (Guadeloupe).

Communication de congrès

Detection of Sugarcane streak mosaic virus in surgarcane from several asian countries

Chatenet M., Mazarin C., Girard J.C., Fernandez E., Gargani D., Rao G.P., Royer M., Rott P.. 2005. In : Ed. Hogarth. International Society of Sugar Cane Technologists Proceedings of the XXV Congress, 30 January - 4 February 2005, Guatemala. Guatemala : ATAGUA, p. 656-663. ISSCT Congress. 25, 2005-01-30/2005-02-04, Guatemala (Guatemala).

Communication de congrès

Le foreur de la canne à sucre. Mise en place d'une lutte biologique à l'aide de trichogrammes à la Réunion

Tabone E., Goebel F.R., Lezcano N., Fernandez E.. 2002. Phytoma-La Défense des Végétaux (553) : p. 32-35.

Article (b-revue à comité de lecture)

Biological control of the sugarcane stem borer Chilo sacchariphagus (Lep: Pyralidae) in Reunion Island. Current and future studies on the use of Trichogramma spp.

Goebel F.R., Tabone E., Rochat J., Fernandez E.. 2001. Proceedings of the Annual Congress of the South African Sugar Technologists' Association, 75 : p. 171-174. Annual Congress of the South African Sugar Technologists' Association (SASTA). 75, 2001-07-31/2001-08-03, Durban (Afrique du Sud).

Article (c-notoriété en attente de mise à jour)

Integrated control of the sugarcane spotted stalk borer Chilo sacchariphagus (Lep:Pyralidae) in Reunion Island

Rochat J., Goebel F.R., Tabone E., Begue L.J.M., Fernandez E., Tibere R., Gauvin J.C., Vercambre B.. 2001. Proceedings of the Annual Congress of the South African Sugar Technologists' Association, 75 : p. 253-254. Annual Congress of the South African Sugar Technologists' Association (SASTA). 75, 2001-07-31/2001-08-03, Durban (Afrique du Sud).

Article (c-notoriété en attente de mise à jour)

Predation and varietal resistance as important components of integrated protection of the sugarcane stemborer Chilo sacchariphagus (Bojer) (Lepidoptera : Pyralidae) in Réunion

Goebel F.R., Fernandez E., Beugue J.M., Tibere R., Alauzet C.. 2000. In : Allsopp P.G. (ed.), Suasa ard W. (ed.). Sugarcane pest management in the new millennium. Indooroopilly : ISSCT, p. 51-59. ISSCT Entomology Workshop. 4, 2000-02-07/2000-02-10, Khon Kaen (Thaïlande).

Communication de congrès

Dégâts et pertes de rendement sur la canne à sucre dus au foreur Chilo sacchariphagus (Bojer) à l'île de la Réunion (Lep.: pyralidae)

Goebel F.R., Fernandez E., Tibere R., Alauzet C.. 1999. Annales de la Société Entomologique de France, 35 : p. 476-481. Conférence internationale francophone d'entomologie. 4, 1998-07-05/1998-07-09, Saint-Malo (France).

Article (a-revue à facteur d'impact)

Prédation par Pheidole megacephala (Fabricius) (Hym. : Formicidae) des oeufs de Chilo sacchariphagus (Bojer) (Lep. : Pyralidae), foreur de la canne à sucre à l'île de la Réunion

Goebel F.R., Fernandez E., Begue L.J.M., Alauzet C.. 1999. Annales de la Société Entomologique de France, 35 : p. 440-442.

Article (a-revue à facteur d'impact)

Protection intégrée sur la canne à sucre à la Réunion : le cas de Chilo sacchariphagus Boj. (Lep., Pyralidae), foreur des tiges

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